Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx41Q91VN6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Gm5566-201ENSMUST00000116118 459 ntBASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.36■□□□□ 0.21
Ddx41Q91VN6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Mir7684-201ENSMUST00000183858 60 ntBASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Gm9063-201ENSMUST00000223299 582 ntBASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx41Q91VN6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Gm14767-201ENSMUST00000121559 586 ntBASIC16.35■□□□□ 0.21
Ddx41Q91VN6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Gm45098-201ENSMUST00000207179 657 ntBASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx41Q91VN6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms