Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Celf4-206ENSMUST00000224553 1729 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Efs-202ENSMUST00000227037 2540 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Mir7654-201ENSMUST00000185082 70 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm6916-202ENSMUST00000205523 195 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm9257-201ENSMUST00000221254 232 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.07□□□□□ -0.16
Vsx1Q91V10 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm15198-201ENSMUST00000117283 177 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm13464-201ENSMUST00000119418 935 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm6244-201ENSMUST00000178732 841 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm2451-201ENSMUST00000199447 999 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm10290-201ENSMUST00000200451 999 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm10478-201ENSMUST00000084451 396 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Olfr582-201ENSMUST00000098212 960 ntBASIC14.06□□□□□ -0.16
Vsx1Q91V10 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vsx1Q91V10 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 AA619741-201ENSMUST00000195095 646 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms