Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.13■□□□□ 0.01
TraipQ8VIG6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.13■□□□□ 0.01
TraipQ8VIG6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Gm7653-201ENSMUST00000214567 508 ntBASIC15.13■□□□□ 0.01
TraipQ8VIG6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TraipQ8VIG6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
TraipQ8VIG6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Gm18905-201ENSMUST00000205454 928 ntBASIC15.12■□□□□ 0.01
TraipQ8VIG6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TraipQ8VIG6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Mir6392-201ENSMUST00000184924 108 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Gm17795-201ENSMUST00000214505 757 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Efs-202ENSMUST00000227037 2540 ntBASIC15.11■□□□□ 0.01
TraipQ8VIG6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TraipQ8VIG6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms