Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Gm11543-201ENSMUST00000120758 370 ntBASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Gm27741-201ENSMUST00000185060 237 ntBASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm1Q8VC85 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Mir3113-201ENSMUST00000175478 76 ntBASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lsm1Q8VC85 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lsm1Q8VC85 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lsm1Q8VC85 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms