Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm6736-201ENSMUST00000166583 948 ntBASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Gm18766-201ENSMUST00000189811 808 ntBASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Top1mtQ8R4U6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Gm8584-201ENSMUST00000171982 758 ntBASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Top1mtQ8R4U6 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm23935-201ENSMUST00000102303 57 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm24270-201ENSMUST00000102326 57 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm24245-201ENSMUST00000157318 57 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm24158-201ENSMUST00000175263 71 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm43575-201ENSMUST00000196420 516 ntBASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Top1mtQ8R4U6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Gm15957-201ENSMUST00000118893 974 ntBASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Top1mtQ8R4U6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms