Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp7Q8R1T1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp7Q8R1T1 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Gm27892-201ENSMUST00000185017 106 ntBASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp7Q8R1T1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp7Q8R1T1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms