Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 BC001981-202ENSMUST00000191393 1545 ntBASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm25144-201ENSMUST00000179561 110 ntBASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm25352-201ENSMUST00000179815 110 ntBASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm38294-201ENSMUST00000192831 381 ntBASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 AA619741-201ENSMUST00000195095 646 ntBASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sf3a1Q8K4Z5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Gm27533-201ENSMUST00000183800 152 ntBASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Gm44872-201ENSMUST00000207864 420 ntBASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Gm16476-201ENSMUST00000221544 139 ntBASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Dupd1-202ENSMUST00000224735 548 ntBASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sf3a1Q8K4Z5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Gm12428-201ENSMUST00000119844 727 ntBASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sf3a1Q8K4Z5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms