Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gm2810-201ENSMUST00000118681 990 ntBASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gm18057-201ENSMUST00000208220 503 ntBASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Cchcr1Q8K2I2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cchcr1Q8K2I2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cchcr1Q8K2I2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cchcr1Q8K2I2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cchcr1Q8K2I2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cchcr1Q8K2I2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms