Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.31□□□□□ -0.12
Abcf3Q8K268 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Gm11780-201ENSMUST00000136880 516 ntBASIC14.31□□□□□ -0.12
Abcf3Q8K268 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.31□□□□□ -0.12
Abcf3Q8K268 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44357-201ENSMUST00000195897 142 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm19658-201ENSMUST00000196231 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44367-201ENSMUST00000196836 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44350-201ENSMUST00000197197 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44390-201ENSMUST00000197533 144 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44313-201ENSMUST00000198018 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44486-201ENSMUST00000198508 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44314-201ENSMUST00000199263 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44394-201ENSMUST00000199558 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44484-201ENSMUST00000199873 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44466-201ENSMUST00000200264 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm44359-201ENSMUST00000200671 138 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gm6376-201ENSMUST00000209407 580 ntBASIC14.3□□□□□ -0.12
Abcf3Q8K268 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcf3Q8K268 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.29□□□□□ -0.12
Abcf3Q8K268 Mir8098-201ENSMUST00000184011 137 ntBASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm28659-201ENSMUST00000188013 759 ntBASIC14.29□□□□□ -0.12
Abcf3Q8K268 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm6296-201ENSMUST00000222599 943 ntBASIC14.29□□□□□ -0.12
Abcf3Q8K268 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.29□□□□□ -0.12
Abcf3Q8K268 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcf3Q8K268 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms