Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gm6973-201ENSMUST00000117080 721 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gm14701-201ENSMUST00000117156 348 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.38□□□□□ -0.11
Clip4Q8CI96 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.37□□□□□ -0.11
Clip4Q8CI96 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Mir6990-201ENSMUST00000183724 91 ntBASIC14.37□□□□□ -0.11
Clip4Q8CI96 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.37□□□□□ -0.11
Clip4Q8CI96 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.37□□□□□ -0.11
Clip4Q8CI96 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.37□□□□□ -0.11
Clip4Q8CI96 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clip4Q8CI96 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.36□□□□□ -0.11
Clip4Q8CI96 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clip4Q8CI96 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.35□□□□□ -0.11
Clip4Q8CI96 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms