Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Dio3-201ENSMUST00000097228 1449 ntBASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hist3h2bbQ8CGP0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm13158-201ENSMUST00000122007 736 ntBASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hist3h2bbQ8CGP0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.73□□□□□ -0.69
Hist3h2bbQ8CGP0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms