Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc38Q8CDN8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc38Q8CDN8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc38Q8CDN8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc38Q8CDN8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc38Q8CDN8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 AW822252-206ENSMUST00000208904 237 ntBASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.84■□□□□ 0.13
Ccdc38Q8CDN8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc38Q8CDN8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc38Q8CDN8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Gm2810-201ENSMUST00000118681 990 ntBASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Gm8584-201ENSMUST00000171982 758 ntBASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Gm27525-201ENSMUST00000184465 107 ntBASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc38Q8CDN8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms