Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.59■□□□□ 0.25
Alx1Q8C8B0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alx1Q8C8B0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Alx1Q8C8B0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alx1Q8C8B0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alx1Q8C8B0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Gm9522-201ENSMUST00000182394 926 ntBASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.58■□□□□ 0.24
Alx1Q8C8B0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alx1Q8C8B0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm22189-201ENSMUST00000103822 86 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms