Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 AA543401-201ENSMUST00000164248 1269 ntBASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Gm17837-201ENSMUST00000186435 985 ntBASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc60Q8C4J0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Ccdc60Q8C4J0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc60Q8C4J0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc60Q8C4J0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc60Q8C4J0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
Ccdc60Q8C4J0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms