Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm27306-201ENSMUST00000183970 107 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Gm46209-201ENSMUST00000217912 553 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm13453-201ENSMUST00000118708 357 ntBASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm17837-201ENSMUST00000186435 985 ntBASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm44344-201ENSMUST00000200287 129 ntBASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm7775-201ENSMUST00000218871 853 ntBASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp44Q8C2S0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp44Q8C2S0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp44Q8C2S0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp44Q8C2S0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Usp44Q8C2S0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gm9229-201ENSMUST00000222777 126 ntBASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gm9063-201ENSMUST00000223299 582 ntBASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp44Q8C2S0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp44Q8C2S0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms