Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Gm7230-201ENSMUST00000173026 815 ntBASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tsen54Q8C2A2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tsen54Q8C2A2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tsen54Q8C2A2 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms