Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Gm15460-201ENSMUST00000118147 391 ntBASIC14.57□□□□□ -0.08
Nup54Q8BTS4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup54Q8BTS4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm14057-201ENSMUST00000120631 482 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm15487-201ENSMUST00000122373 465 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup54Q8BTS4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms