Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Gm18057-201ENSMUST00000208220 503 ntBASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Gm8396-201ENSMUST00000057361 823 ntBASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf4Q8BQZ5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cpsf4Q8BQZ5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Gm13464-201ENSMUST00000119418 935 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Gm43125-201ENSMUST00000201724 730 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms