Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Gm15770-201ENSMUST00000117498 584 ntBASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col16a1Q8BLX7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Snora73a-201ENSMUST00000082453 205 ntBASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col16a1Q8BLX7 Gm5620-201ENSMUST00000077991 1348 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm13342-201ENSMUST00000121055 207 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm7029-201ENSMUST00000173226 450 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Mir3547-201ENSMUST00000175461 88 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Gm26927-201ENSMUST00000182385 965 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col16a1Q8BLX7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col16a1Q8BLX7 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm12403-201ENSMUST00000121384 959 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms