Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 AW822252-206ENSMUST00000208904 237 ntBASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Thap2-203ENSMUST00000218989 527 ntBASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf38Q8BI21 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Rnf38Q8BI21 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Gm5479-201ENSMUST00000160578 435 ntBASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Gm45098-201ENSMUST00000207179 657 ntBASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf38Q8BI21 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Grk6-205ENSMUST00000224653 2976 ntBASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.76□□□□□ -0.21
Rnf38Q8BI21 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf38Q8BI21 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms