Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Gm3436-201ENSMUST00000179930 840 ntBASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40bQ80W14 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Gm27892-201ENSMUST00000185017 106 ntBASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Gm10766-202ENSMUST00000194123 606 ntBASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40bQ80W14 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Carlr-201ENSMUST00000181515 2574 ntBASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Mir6392-201ENSMUST00000184924 108 ntBASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Gm28760-201ENSMUST00000185995 736 ntBASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Gm5035-201ENSMUST00000215581 927 ntBASIC16.41■□□□□ 0.22
Prpf40bQ80W14 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms