Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm13464-201ENSMUST00000119418 935 ntBASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm43630-201ENSMUST00000201550 776 ntBASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3tc2Q80VA5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm15806-201ENSMUST00000120696 955 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm2451-201ENSMUST00000199447 999 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm10290-201ENSMUST00000200451 999 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3tc2Q80VA5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms