Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.32□□□□□ -0.12
Usp8Q80U87 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm2451-201ENSMUST00000199447 999 ntBASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm10290-201ENSMUST00000200451 999 ntBASIC14.32□□□□□ -0.12
Usp8Q80U87 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.32□□□□□ -0.12
Usp8Q80U87 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp8Q80U87 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.31□□□□□ -0.12
Usp8Q80U87 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp8Q80U87 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp8Q80U87 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm27301-201ENSMUST00000184012 127 ntBASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm17968-201ENSMUST00000194902 784 ntBASIC14.3□□□□□ -0.12
Usp8Q80U87 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.3□□□□□ -0.12
Usp8Q80U87 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.3□□□□□ -0.12
Usp8Q80U87 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp8Q80U87 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp8Q80U87 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms