Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm9908-201ENSMUST00000211534 448 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Gm12138-201ENSMUST00000122180 951 ntBASIC13.17□□□□□ -0.3
Pif1Q80SX8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.17□□□□□ -0.3
Pif1Q80SX8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Gm15823-201ENSMUST00000064305 670 ntBASIC13.17□□□□□ -0.3
Pif1Q80SX8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pif1Q80SX8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm6912-201ENSMUST00000117218 544 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm28760-201ENSMUST00000185995 736 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.16□□□□□ -0.3
Pif1Q80SX8 Gm9797-201ENSMUST00000052902 613 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms