Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm12384-201ENSMUST00000119228 919 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm27514-201ENSMUST00000183692 110 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm27572-201ENSMUST00000183702 255 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx55Q6ZPL9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm38223-201ENSMUST00000194484 695 ntBASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm40466-201ENSMUST00000212174 422 ntBASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Mir497b-201ENSMUST00000093601 125 ntBASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx55Q6ZPL9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx55Q6ZPL9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx55Q6ZPL9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Ddx55Q6ZPL9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ddx55Q6ZPL9 Carlr-201ENSMUST00000181515 2574 ntBASIC16.08■□□□□ 0.17
Ddx55Q6ZPL9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ddx55Q6ZPL9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms