Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NfrkbQ6PIJ4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Gm18624-201ENSMUST00000220966 658 ntBASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NfrkbQ6PIJ4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gm6916-202ENSMUST00000205523 195 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Carlr-201ENSMUST00000181515 2574 ntBASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NfrkbQ6PIJ4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms