Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm4271-201ENSMUST00000174444 973 ntBASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd4Q6PDQ2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd4Q6PDQ2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm27847-201ENSMUST00000183711 107 ntBASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm27375-201ENSMUST00000183799 107 ntBASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.27■□□□□ 0.51
Chd4Q6PDQ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Gm44397-201ENSMUST00000195950 113 ntBASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Chd4Q6PDQ2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm15198-201ENSMUST00000117283 177 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm8213-201ENSMUST00000118191 441 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm10156-201ENSMUST00000122364 462 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm5161-201ENSMUST00000075243 853 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm16177-201ENSMUST00000120728 718 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Gm9823-201ENSMUST00000051212 327 ntBASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd4Q6PDQ2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms