Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 CT010486.3-201ENSMUST00000224555 811 ntBASIC15□□□□□ -0.01
Scube3Q66PY1 AC102291.3-201ENSMUST00000226566 405 ntBASIC15□□□□□ -0.01
Scube3Q66PY1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scube3Q66PY1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scube3Q66PY1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15□□□□□ -0.01
Scube3Q66PY1 Gm43697-201ENSMUST00000199637 2581 ntBASIC15□□□□□ -0.01
Scube3Q66PY1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15□□□□□ -0.01
Scube3Q66PY1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15□□□□□ -0.01
Scube3Q66PY1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scube3Q66PY1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Gm27306-201ENSMUST00000183970 107 ntBASIC14.99□□□□□ -0.01
Scube3Q66PY1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Gm20949-201ENSMUST00000206478 952 ntBASIC14.99□□□□□ -0.01
Scube3Q66PY1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scube3Q66PY1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 AC107452.3-201ENSMUST00000228807 1308 ntBASIC14.98□□□□□ -0.01
Scube3Q66PY1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Gm43438-201ENSMUST00000198133 379 ntBASIC14.98□□□□□ -0.01
Scube3Q66PY1 Gm44344-201ENSMUST00000200287 129 ntBASIC14.98□□□□□ -0.01
Scube3Q66PY1 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.98□□□□□ -0.01
Scube3Q66PY1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scube3Q66PY1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scube3Q66PY1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms