Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.86□□□□□ -0.51
Commd3Q63829 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Commd3Q63829 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Commd3Q63829 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.86□□□□□ -0.51
Commd3Q63829 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.86□□□□□ -0.51
Commd3Q63829 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Commd3Q63829 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.86□□□□□ -0.51
Commd3Q63829 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.86□□□□□ -0.51
Commd3Q63829 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Commd3Q63829 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Commd3Q63829 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Commd3Q63829 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.85□□□□□ -0.51
Commd3Q63829 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.85□□□□□ -0.51
Commd3Q63829 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.85□□□□□ -0.51
Commd3Q63829 Gm8097-201ENSMUST00000117903 829 ntBASIC11.85□□□□□ -0.51
Commd3Q63829 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.85□□□□□ -0.51
Commd3Q63829 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.85□□□□□ -0.51
Commd3Q63829 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Commd3Q63829 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Commd3Q63829 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.85□□□□□ -0.51
Commd3Q63829 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Commd3Q63829 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Commd3Q63829 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Commd3Q63829 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Commd3Q63829 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.84□□□□□ -0.51
Commd3Q63829 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.84□□□□□ -0.51
Commd3Q63829 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.84□□□□□ -0.51
Commd3Q63829 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Commd3Q63829 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Commd3Q63829 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Commd3Q63829 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Commd3Q63829 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Commd3Q63829 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Commd3Q63829 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Commd3Q63829 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Commd3Q63829 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Commd3Q63829 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Commd3Q63829 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms