Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.49■□□□□ 0.39
Trim27Q62158 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim27Q62158 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim27Q62158 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.49■□□□□ 0.39
Trim27Q62158 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Trim27Q62158 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim27Q62158 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim27Q62158 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.48■□□□□ 0.39
Trim27Q62158 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.48■□□□□ 0.39
Trim27Q62158 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim27Q62158 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Gm14701-201ENSMUST00000117156 348 ntBASIC17.48■□□□□ 0.39
Trim27Q62158 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim27Q62158 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim27Q62158 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim27Q62158 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.48■□□□□ 0.39
Trim27Q62158 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.48■□□□□ 0.39
Trim27Q62158 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim27Q62158 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim27Q62158 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Gm24543-201ENSMUST00000103867 82 ntBASIC17.47■□□□□ 0.39
Trim27Q62158 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
Trim27Q62158 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim27Q62158 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim27Q62158 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim27Q62158 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim27Q62158 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.46■□□□□ 0.39
Trim27Q62158 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.46■□□□□ 0.39
Trim27Q62158 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.46■□□□□ 0.39
Trim27Q62158 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim27Q62158 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim27Q62158 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim27Q62158 Gm38294-201ENSMUST00000192831 381 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms