Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.7□□□□□ -0.22
ClpbQ60649 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpbQ60649 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
ClpbQ60649 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpbQ60649 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.7□□□□□ -0.22
ClpbQ60649 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ClpbQ60649 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpbQ60649 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpbQ60649 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ClpbQ60649 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ClpbQ60649 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.69□□□□□ -0.22
ClpbQ60649 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClpbQ60649 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.69□□□□□ -0.22
ClpbQ60649 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.69□□□□□ -0.22
ClpbQ60649 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Auts2-212ENSMUST00000178555 309 ntBASIC13.69□□□□□ -0.22
ClpbQ60649 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.69□□□□□ -0.22
ClpbQ60649 Gm2451-201ENSMUST00000199447 999 ntBASIC13.69□□□□□ -0.22
ClpbQ60649 Gm10290-201ENSMUST00000200451 999 ntBASIC13.69□□□□□ -0.22
ClpbQ60649 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.69□□□□□ -0.22
ClpbQ60649 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.69□□□□□ -0.22
ClpbQ60649 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClpbQ60649 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.69□□□□□ -0.22
ClpbQ60649 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClpbQ60649 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ClpbQ60649 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpbQ60649 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.68□□□□□ -0.22
ClpbQ60649 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClpbQ60649 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.68□□□□□ -0.22
ClpbQ60649 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
ClpbQ60649 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Gm22175-201ENSMUST00000175007 78 ntBASIC13.68□□□□□ -0.22
ClpbQ60649 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.68□□□□□ -0.22
ClpbQ60649 Olfr286-202ENSMUST00000205305 969 ntBASIC13.68□□□□□ -0.22
ClpbQ60649 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.68□□□□□ -0.22
ClpbQ60649 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpbQ60649 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ClpbQ60649 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpbQ60649 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.67□□□□□ -0.22
ClpbQ60649 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms