Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm7222-201ENSMUST00000117512 906 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm11764-201ENSMUST00000120221 623 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm5682-201ENSMUST00000173402 505 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm6089-201ENSMUST00000197666 938 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms