Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Gm9824-201ENSMUST00000178707 561 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Gm43125-201ENSMUST00000201724 730 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rnf20Q5DTM8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Gm44335-201ENSMUST00000196879 141 ntBASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Gm44297-201ENSMUST00000198304 141 ntBASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Gm44346-201ENSMUST00000198851 141 ntBASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Rnf20Q5DTM8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Rnf20Q5DTM8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm8584-201ENSMUST00000171982 758 ntBASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf20Q5DTM8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Gm6222-201ENSMUST00000120787 396 ntBASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.94■□□□□ 0.3
Rnf20Q5DTM8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms