Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Auts2-212ENSMUST00000178555 309 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gm27306-201ENSMUST00000183970 107 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gm27321-201ENSMUST00000185021 205 ntBASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm4Q4VBF2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Gm15653-201ENSMUST00000119247 907 ntBASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm4Q4VBF2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm4Q4VBF2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm4Q4VBF2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm4Q4VBF2 Gm27989-201ENSMUST00000184721 107 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms