Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trim40Q3UWA4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim40Q3UWA4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim40Q3UWA4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim40Q3UWA4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gm13464-201ENSMUST00000119418 935 ntBASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim40Q3UWA4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim40Q3UWA4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim40Q3UWA4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms