Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Gm2274-201ENSMUST00000184539 609 ntBASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Gm18041-201ENSMUST00000218210 618 ntBASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1brtQ3UNC9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1brtQ3UNC9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1brtQ3UNC9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms