Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 AY702102-202ENSMUST00000194651 1173 ntBASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.44■□□□□ 0.7
Puf60Q3UEB3 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Gm21038-201ENSMUST00000222205 1383 ntBASIC19.44■□□□□ 0.7
Puf60Q3UEB3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm17794-201ENSMUST00000220252 955 ntBASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Puf60Q3UEB3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm4971-201ENSMUST00000205991 1108 ntBASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Gm9816-201ENSMUST00000122292 1414 ntBASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Puf60Q3UEB3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Gm12928-201ENSMUST00000117115 573 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Gm12416-201ENSMUST00000120911 1008 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Mir1982-201ENSMUST00000157368 74 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Gm43630-201ENSMUST00000201550 776 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Gm7287-201ENSMUST00000205267 602 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Puf60Q3UEB3 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.41■□□□□ 0.7
Puf60Q3UEB3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms