Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Q3U1D9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.37□□□□□ -0.43
Q3U1D9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Q3U1D9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Q3U1D9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Q3U1D9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.36□□□□□ -0.43
Q3U1D9 Gm11424-201ENSMUST00000121929 829 ntBASIC12.36□□□□□ -0.43
Q3U1D9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.36□□□□□ -0.43
Q3U1D9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.36□□□□□ -0.43
Q3U1D9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.36□□□□□ -0.43
Q3U1D9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Q3U1D9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Q3U1D9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Q3U1D9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.36□□□□□ -0.43
Q3U1D9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Q3U1D9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Q3U1D9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Q3U1D9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.35□□□□□ -0.43
Q3U1D9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.35□□□□□ -0.43
Q3U1D9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm5745-201ENSMUST00000183748 313 ntBASIC12.35□□□□□ -0.43
Q3U1D9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Q3U1D9 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.35□□□□□ -0.43
Q3U1D9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.35□□□□□ -0.43
Q3U1D9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.35□□□□□ -0.43
Q3U1D9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q3U1D9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q3U1D9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q3U1D9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.34□□□□□ -0.43
Q3U1D9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3U1D9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.34□□□□□ -0.43
Q3U1D9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3U1D9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3U1D9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Q3U1D9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms