Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ptchd3Q0EEE2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.77□□□□□ -0.2
Ptchd3Q0EEE2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ptchd3Q0EEE2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ptchd3Q0EEE2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ptchd3Q0EEE2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ptchd3Q0EEE2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms