Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.45□□□□□ -0.1
Ebf1Q07802 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ebf1Q07802 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.45□□□□□ -0.1
Ebf1Q07802 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm2451-201ENSMUST00000199447 999 ntBASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm10290-201ENSMUST00000200451 999 ntBASIC14.45□□□□□ -0.1
Ebf1Q07802 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm9229-201ENSMUST00000222777 126 ntBASIC14.45□□□□□ -0.1
Ebf1Q07802 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.45□□□□□ -0.1
Ebf1Q07802 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf1Q07802 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Gm9522-201ENSMUST00000182394 926 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 Gm45453-201ENSMUST00000211758 853 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.44□□□□□ -0.1
Ebf1Q07802 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.44□□□□□ -0.1
Ebf1Q07802 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf1Q07802 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.43□□□□□ -0.1
Ebf1Q07802 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Gm12091-201ENSMUST00000146791 830 ntBASIC14.43□□□□□ -0.1
Ebf1Q07802 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Gm9908-201ENSMUST00000211534 448 ntBASIC14.43□□□□□ -0.1
Ebf1Q07802 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.43□□□□□ -0.1
Ebf1Q07802 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.43□□□□□ -0.1
Ebf1Q07802 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ebf1Q07802 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf1Q07802 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ebf1Q07802 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf1Q07802 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms