Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.01□□□□□ -0.17
Sox4Q06831 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox4Q06831 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm9063-201ENSMUST00000223299 582 ntBASIC14.01□□□□□ -0.17
Sox4Q06831 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sox4Q06831 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sox4Q06831 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm5320-201ENSMUST00000207163 1519 ntBASIC14□□□□□ -0.17
Sox4Q06831 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sox4Q06831 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Gm15653-201ENSMUST00000119247 907 ntBASIC14□□□□□ -0.17
Sox4Q06831 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14□□□□□ -0.17
Sox4Q06831 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Gm27306-201ENSMUST00000183970 107 ntBASIC14□□□□□ -0.17
Sox4Q06831 Gm27989-201ENSMUST00000184721 107 ntBASIC14□□□□□ -0.17
Sox4Q06831 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sox4Q06831 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 AC121804.3-201ENSMUST00000223420 295 ntBASIC14□□□□□ -0.17
Sox4Q06831 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sox4Q06831 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox4Q06831 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox4Q06831 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox4Q06831 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox4Q06831 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox4Q06831 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.99□□□□□ -0.17
Sox4Q06831 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox4Q06831 Gm15957-201ENSMUST00000118893 974 ntBASIC13.99□□□□□ -0.17
Sox4Q06831 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox4Q06831 Gm6916-202ENSMUST00000205523 195 ntBASIC13.99□□□□□ -0.17
Sox4Q06831 Gm7775-201ENSMUST00000218871 853 ntBASIC13.99□□□□□ -0.17
Sox4Q06831 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox4Q06831 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox4Q06831 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Sox4Q06831 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox4Q06831 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox4Q06831 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox4Q06831 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox4Q06831 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox4Q06831 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms