Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.52□□□□□ -0.4
Thbs3Q05895 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Thbs3Q05895 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.52□□□□□ -0.4
Thbs3Q05895 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Thbs3Q05895 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Thbs3Q05895 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs3Q05895 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs3Q05895 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Gm27631-201ENSMUST00000184163 466 ntBASIC12.52□□□□□ -0.41
Thbs3Q05895 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Thbs3Q05895 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs3Q05895 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm15957-201ENSMUST00000118893 974 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm15693-201ENSMUST00000120470 637 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm27430-201ENSMUST00000184585 107 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm44333-201ENSMUST00000197168 107 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.51□□□□□ -0.41
Thbs3Q05895 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.51□□□□□ -0.41
Thbs3Q05895 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Thbs3Q05895 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Thbs3Q05895 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms