Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Smn1P97801 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smn1P97801 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smn1P97801 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smn1P97801 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smn1P97801 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smn1P97801 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.23□□□□□ -0.45
Smn1P97801 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.23□□□□□ -0.45
Smn1P97801 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Gm28033-201ENSMUST00000184224 96 ntBASIC12.23□□□□□ -0.45
Smn1P97801 Ank2-226ENSMUST00000189368 339 ntBASIC12.23□□□□□ -0.45
Smn1P97801 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.23□□□□□ -0.45
Smn1P97801 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Smn1P97801 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smn1P97801 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smn1P97801 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smn1P97801 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.22□□□□□ -0.45
Smn1P97801 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.22□□□□□ -0.45
Smn1P97801 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.22□□□□□ -0.45
Smn1P97801 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.22□□□□□ -0.45
Smn1P97801 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smn1P97801 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smn1P97801 Gm8584-201ENSMUST00000171982 758 ntBASIC12.22□□□□□ -0.45
Smn1P97801 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Smn1P97801 Gm27459-201ENSMUST00000184860 107 ntBASIC12.22□□□□□ -0.45
Smn1P97801 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Gm34391-201ENSMUST00000203706 907 ntBASIC12.22□□□□□ -0.45
Smn1P97801 Gm44487-201ENSMUST00000205145 325 ntBASIC12.22□□□□□ -0.45
Smn1P97801 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.22□□□□□ -0.45
Smn1P97801 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smn1P97801 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smn1P97801 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms