Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ldb1P70662 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Gm13015-201ENSMUST00000118674 204 ntBASIC14.2□□□□□ -0.14
Ldb1P70662 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ldb1P70662 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.2□□□□□ -0.14
Ldb1P70662 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Gm18737-201ENSMUST00000173594 937 ntBASIC14.2□□□□□ -0.14
Ldb1P70662 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.2□□□□□ -0.14
Ldb1P70662 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ldb1P70662 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.2□□□□□ -0.14
Ldb1P70662 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ldb1P70662 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ldb1P70662 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Gm27702-201ENSMUST00000184512 56 ntBASIC14.19□□□□□ -0.14
Ldb1P70662 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ldb1P70662 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb1P70662 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ldb1P70662 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.18□□□□□ -0.14
Ldb1P70662 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb1P70662 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ldb1P70662 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ldb1P70662 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb1P70662 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.18□□□□□ -0.14
Ldb1P70662 Gm43474-201ENSMUST00000196415 774 ntBASIC14.18□□□□□ -0.14
Ldb1P70662 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.18□□□□□ -0.14
Ldb1P70662 Chchd1-203ENSMUST00000224633 557 ntBASIC14.18□□□□□ -0.14
Ldb1P70662 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.18□□□□□ -0.14
Ldb1P70662 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ldb1P70662 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb1P70662 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms