Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shox2P70390 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shox2P70390 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.08□□□□□ -0.16
Shox2P70390 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.08□□□□□ -0.16
Shox2P70390 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Shox2P70390 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 Gm9682-201ENSMUST00000197505 556 ntBASIC14.08□□□□□ -0.16
Shox2P70390 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.08□□□□□ -0.16
Shox2P70390 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Shox2P70390 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.07□□□□□ -0.16
Shox2P70390 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.07□□□□□ -0.16
Shox2P70390 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Shox2P70390 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.06□□□□□ -0.16
Shox2P70390 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.06□□□□□ -0.16
Shox2P70390 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.06□□□□□ -0.16
Shox2P70390 Gm29518-201ENSMUST00000190858 372 ntBASIC14.06□□□□□ -0.16
Shox2P70390 Gm37230-201ENSMUST00000194491 818 ntBASIC14.06□□□□□ -0.16
Shox2P70390 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms