Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shox2P70390 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shox2P70390 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.08□□□□□ -0.15
Shox2P70390 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.08□□□□□ -0.16
Shox2P70390 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.08□□□□□ -0.16
Shox2P70390 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Shox2P70390 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 Gm9682-201ENSMUST00000197505 556 ntBASIC14.08□□□□□ -0.16
Shox2P70390 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.08□□□□□ -0.16
Shox2P70390 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.08□□□□□ -0.16
Shox2P70390 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Shox2P70390 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shox2P70390 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shox2P70390 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.07□□□□□ -0.16
Shox2P70390 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.07□□□□□ -0.16
Shox2P70390 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.07□□□□□ -0.16
Shox2P70390 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Shox2P70390 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shox2P70390 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.06□□□□□ -0.16
Shox2P70390 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.06□□□□□ -0.16
Shox2P70390 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.06□□□□□ -0.16
Shox2P70390 Gm29518-201ENSMUST00000190858 372 ntBASIC14.06□□□□□ -0.16
Shox2P70390 Gm37230-201ENSMUST00000194491 818 ntBASIC14.06□□□□□ -0.16
Shox2P70390 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shox2P70390 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shox2P70390 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms