Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.68■□□□□ 0.1
Hmgb1P63158 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Hmgb1P63158 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgb1P63158 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gm45053-201ENSMUST00000206112 2499 ntBASIC15.67■□□□□ 0.1
Hmgb1P63158 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Hmgb1P63158 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.67■□□□□ 0.1
Hmgb1P63158 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.67■□□□□ 0.1
Hmgb1P63158 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.67■□□□□ 0.1
Hmgb1P63158 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.67■□□□□ 0.1
Hmgb1P63158 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hmgb1P63158 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hmgb1P63158 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm11025-201ENSMUST00000140773 466 ntBASIC15.66■□□□□ 0.1
Hmgb1P63158 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.66■□□□□ 0.1
Hmgb1P63158 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm20553-201ENSMUST00000204205 844 ntBASIC15.66■□□□□ 0.1
Hmgb1P63158 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.66■□□□□ 0.1
Hmgb1P63158 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.66■□□□□ 0.1
Hmgb1P63158 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hmgb1P63158 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms