Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.16□□□□□ -0.78
Rpl39P62892 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm14042-201ENSMUST00000120139 833 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm7284-201ENSMUST00000131667 944 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.16□□□□□ -0.78
Rpl39P62892 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Rpl39P62892 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rpl39P62892 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rpl39P62892 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Rpl39P62892 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Rpl39P62892 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Rpl39P62892 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rpl39P62892 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.15□□□□□ -0.78
Rpl39P62892 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.15□□□□□ -0.78
Rpl39P62892 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rpl39P62892 Gm5682-201ENSMUST00000173402 505 ntBASIC10.15□□□□□ -0.78
Rpl39P62892 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.15□□□□□ -0.78
Rpl39P62892 Gm7787-201ENSMUST00000216858 688 ntBASIC10.15□□□□□ -0.78
Rpl39P62892 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rpl39P62892 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms