Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm18062-201ENSMUST00000208020 547 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Gm18055-201ENSMUST00000208254 547 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm18934-201ENSMUST00000216671 1044 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Gm17794-201ENSMUST00000220252 955 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Gm8598-201ENSMUST00000221184 836 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm24447-201ENSMUST00000083977 338 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nphp4P59240 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nphp4P59240 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Gm5161-201ENSMUST00000075243 853 ntBASIC19.1■□□□□ 0.65
Nphp4P59240 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Nphp4P59240 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
Nphp4P59240 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC19.1■□□□□ 0.65
Nphp4P59240 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nphp4P59240 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Nphp4P59240 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Nphp4P59240 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.09■□□□□ 0.65
Nphp4P59240 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.09■□□□□ 0.65
Nphp4P59240 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Nphp4P59240 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nphp4P59240 Gm44397-201ENSMUST00000195950 113 ntBASIC19.08■□□□□ 0.65
Nphp4P59240 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.08■□□□□ 0.65
Nphp4P59240 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nphp4P59240 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nphp4P59240 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nphp4P59240 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nphp4P59240 Gm13612-201ENSMUST00000119276 390 ntBASIC19.08■□□□□ 0.64
Nphp4P59240 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.08■□□□□ 0.64
Nphp4P59240 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Gm38223-201ENSMUST00000194484 695 ntBASIC19.08■□□□□ 0.64
Nphp4P59240 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC19.08■□□□□ 0.64
Nphp4P59240 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nphp4P59240 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.07■□□□□ 0.64
Nphp4P59240 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nphp4P59240 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms