Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdx1P52946 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.1□□□□□ -0.15
Pdx1P52946 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pdx1P52946 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pdx1P52946 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 BC001981-202ENSMUST00000191393 1545 ntBASIC14.1□□□□□ -0.15
Pdx1P52946 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdx1P52946 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdx1P52946 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Gm25925-201ENSMUST00000158314 306 ntBASIC14.09□□□□□ -0.15
Pdx1P52946 Gm27618-201ENSMUST00000183671 60 ntBASIC14.09□□□□□ -0.15
Pdx1P52946 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.09□□□□□ -0.15
Pdx1P52946 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Pdx1P52946 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.09□□□□□ -0.15
Pdx1P52946 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.09□□□□□ -0.15
Pdx1P52946 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdx1P52946 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pdx1P52946 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdx1P52946 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdx1P52946 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdx1P52946 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Pdx1P52946 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdx1P52946 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdx1P52946 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Pdx1P52946 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdx1P52946 Gm27622-201ENSMUST00000183779 60 ntBASIC14.08□□□□□ -0.16
Pdx1P52946 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdx1P52946 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdx1P52946 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Dupd1-202ENSMUST00000224735 548 ntBASIC14.08□□□□□ -0.16
Pdx1P52946 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Mir125a-201ENSMUST00000083545 68 ntBASIC14.08□□□□□ -0.16
Pdx1P52946 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdx1P52946 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.08□□□□□ -0.16
Pdx1P52946 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdx1P52946 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdx1P52946 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms