Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lhx3P50481 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lhx3P50481 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lhx3P50481 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lhx3P50481 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lhx3P50481 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.42□□□□□ -0.1
Lhx3P50481 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lhx3P50481 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.41□□□□□ -0.1
Lhx3P50481 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lhx3P50481 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lhx3P50481 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.41□□□□□ -0.1
Lhx3P50481 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lhx3P50481 Gm21470-201ENSMUST00000187680 696 ntBASIC14.41□□□□□ -0.1
Lhx3P50481 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.41□□□□□ -0.1
Lhx3P50481 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.41□□□□□ -0.1
Lhx3P50481 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Lhx3P50481 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lhx3P50481 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lhx3P50481 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lhx3P50481 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lhx3P50481 Syt7-204ENSMUST00000223586 1344 ntBASIC14.41□□□□□ -0.1
Lhx3P50481 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lhx3P50481 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Lhx3P50481 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lhx3P50481 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Gm12585-201ENSMUST00000117307 290 ntBASIC14.4□□□□□ -0.1
Lhx3P50481 Gm15321-201ENSMUST00000121290 288 ntBASIC14.4□□□□□ -0.1
Lhx3P50481 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Lhx3P50481 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.4□□□□□ -0.1
Lhx3P50481 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.4□□□□□ -0.1
Lhx3P50481 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.4□□□□□ -0.1
Lhx3P50481 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lhx3P50481 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lhx3P50481 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lhx3P50481 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.4□□□□□ -0.1
Lhx3P50481 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Lhx3P50481 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Lhx3P50481 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Lhx3P50481 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lhx3P50481 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.39□□□□□ -0.11
Lhx3P50481 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.39□□□□□ -0.11
Lhx3P50481 Gm24694-201ENSMUST00000180054 110 ntBASIC14.39□□□□□ -0.11
Lhx3P50481 Gm9522-201ENSMUST00000182394 926 ntBASIC14.39□□□□□ -0.11
Lhx3P50481 Gm27663-201ENSMUST00000184839 110 ntBASIC14.39□□□□□ -0.11
Lhx3P50481 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lhx3P50481 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms